Welcome to the homepage of metano. If you use the software for your own published work, we kindly ask that you cite our recent publication.
|Table of Contents|
|What is metano?|
|What is metano?|
|metano is an open-source software toolbox for analyzing the capabilities of metabolic networks and for
assisting in metabolic reconstruction. The software is written in Python and is designed to be easy to use and run
reasonably fast. metano implements a set of basic tools for the analysis of metabolic networks, including
Flux Balance Analysis (FBA) and Minimization of Metabolic Adjustment (MOMA). In addition, metano provides
more advanced methods such as Flux Variability Analysis (FVA) and the automated analysis of all single-knockout
mutants. All methods are available both as Python functions and as stand-alone command line scripts, which take lists
of reactions in plain ASCII format as input. metano is designed to run in any Linux environment. Algorithms
with a long running time have been parallelized using MPI, which allows their execution on cluster computers.
As all tools in metano are available as stand-alone scripts that require no adjustment of numerical parameters, it is very easy to use by modelers without any programming experience.
|Click here to download the current release,
The initial release v0.8 beta is available from here.
See here for installation instructions.
|A quick reference for metano can be found here.|
|Riemer SA, Rex R, Schomburg D. A metabolite-centric view on flux distributions in genome-scale metabolic models. BMC Syst Biol, 7:33 (2013). Free full text|
|If you have any questions regarding metano or this website, please contact
Technische Universität Carolo-Wilhelmina zu Braunschweig
Department of Bioinformatics and Biochemistry
Langer Kamp 19b
38106 Braunschweig, Germany
Phone: +49 531 391-8306
The website of our department can be found here.
|metano is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License
as published by the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
metano is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.